IL_6R7Q_113
3D structure
- PDB id
- 6R7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with Sec61.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UCAAAGU*AAUGAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R7Q_113 not in the Motif Atlas
- Homologous match to IL_8C3A_093
- Geometric discrepancy: 0.1844
- The information below is about IL_8C3A_093
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36973.8
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
6R7Q|1|5|U|3715
6R7Q|1|5|C|3716
6R7Q|1|5|A|3717
6R7Q|1|5|A|3718
6R7Q|1|5|A|3719
6R7Q|1|5|G|3720
6R7Q|1|5|U|3721
*
6R7Q|1|5|A|3732
6R7Q|1|5|A|3733
6R7Q|1|5|U|3734
6R7Q|1|5|G|3735
6R7Q|1|5|A|3736
6R7Q|1|5|A|3737
6R7Q|1|5|G|3738
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain A
- uL2
- Chain i
- 60S ribosomal protein L36
- Chain o
- eL42
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