IL_6R7Q_212
3D structure
- PDB id
- 6R7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with Sec61.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAAAAAAUU*ACCGCAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R7Q_212 not in the Motif Atlas
- Homologous match to IL_4V88_425
- Geometric discrepancy: 0.2536
- The information below is about IL_4V88_425
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_53064.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6R7Q|1|K|G|807
6R7Q|1|K|A|808
6R7Q|1|K|A|809
6R7Q|1|K|A|810
6R7Q|1|K|A|811
6R7Q|1|K|A|812
6R7Q|1|K|A|813
6R7Q|1|K|U|814
6R7Q|1|K|U|815
*
6R7Q|1|K|A|849
6R7Q|1|K|C|850
6R7Q|1|K|C|851
6R7Q|1|K|G|852
6R7Q|1|K|C|853
6R7Q|1|K|A|854
6R7Q|1|K|G|855
6R7Q|1|K|C|856
Current chains
- Chain K
- 18S ribosomal RNA
Nearby chains
- Chain DD
- Ribosomal protein S9 (Predicted)
- Chain EE
- Ribosomal protein S11
- Chain TT
- Ribosomal protein S15a
- Chain x
- 40S ribosomal protein S4
Coloring options: