Motif IL_53064.1 Version IL_53064.1 of this group appears in releases 3.88 to 3.89
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 1-16 | 2-15 | 3-13 | 9-10 | 13-14 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_8C3A_503 | 8C3A | 0.0000 | 1 | CM | SSU rRNA | G | 736 | A | 737 | A | 738 | A | 739 | A | 740 | A | 741 | A | 742 | U | 743 | U | 744 | * | A | 775 | U | 776 | A | 777 | U | 778 | A | 780 | G | 781 | C | 782 | cWW | cWW | ncWW | cWW | ncSH |
2 | IL_4V88_425 | 4V88 | 0.5095 | 1 | A6 | SSU rRNA | G | 751 | A | 752 | A | 753 | A | 754 | A | 755 | A | 756 | A | 757 | U | 758 | U | 759 | * | A | 791 | U | 792 | A | 793 | U | 794 | A | 796 | G | 797 | C | 798 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GAAAAAAUU*AUAUUAGC | 2 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AAAAAAU*UAUUAG | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Heat map statistics
- Min 0.51 | Avg 0.25 | Max 0.51
Coloring options: