IL_6R86_076
3D structure
- PDB id
- 6R86 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast Vms1-60S ribosomal subunit complex (post-state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AGUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 6R86|1|1|G|2335
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R86_076 not in the Motif Atlas
- Geometric match to IL_4WF9_065
- Geometric discrepancy: 0.1563
- The information below is about IL_4WF9_065
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
6R86|1|1|A|1901
6R86|1|1|G|1902
6R86|1|1|U|1903
6R86|1|1|C|1904
6R86|1|1|G|1905
6R86|1|1|G|1906
*
6R86|1|1|C|2333
6R86|1|1|U|2334
6R86|1|1|G|2335
6R86|1|1|U|2336
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain F
- 60S ribosomal protein L3
- Chain x
- 60S ribosomal protein L23-A
Coloring options: