IL_6RI5_069
3D structure
- PDB id
- 6RI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UUAAC*GGAAGA
- Length
- 11 nucleotides
- Bulged bases
- 6RI5|1|A|G|1751
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6RI5_069 not in the Motif Atlas
- Homologous match to IL_8C3A_077
- Geometric discrepancy: 0.1035
- The information below is about IL_8C3A_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69313.1
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
6RI5|1|A|U|1694
6RI5|1|A|U|1695
6RI5|1|A|A|1696
6RI5|1|A|A|1697
6RI5|1|A|C|1698
*
6RI5|1|A|G|1747
6RI5|1|A|G|1748
6RI5|1|A|A|1749
6RI5|1|A|A|1750
6RI5|1|A|G|1751
6RI5|1|A|A|1752
Current chains
- Chain A
- 25S RNA
Nearby chains
- Chain g
- 60S ribosomal protein L34-A
- Chain j
- 60S ribosomal protein L38
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