IL_6RM3_027
3D structure
- PDB id
- 6RM3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AUUCUAAA*UU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6RM3_027 not in the Motif Atlas
- Homologous match to IL_5TBW_049
- Geometric discrepancy: 0.2066
- The information below is about IL_5TBW_049
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_84902.1
- Basepair signature
- cWW-L-cWW-L-L-R-cHH
- Number of instances in this motif group
- 2
Unit IDs
6RM3|1|L50|A|875
6RM3|1|L50|U|876
6RM3|1|L50|U|877
6RM3|1|L50|C|878
6RM3|1|L50|U|879
6RM3|1|L50|A|880
6RM3|1|L50|A|881
6RM3|1|L50|A|882
*
6RM3|1|L50|U|1023
6RM3|1|L50|U|1024
Current chains
- Chain L50
- 23S rRNA
Nearby chains
- Chain LF0
- uL30
- Chain LFF
- eL33
- Chain LO0
- uL13
- Chain LS0
- eL20
Coloring options: