IL_6RM3_038
3D structure
- PDB id
- 6RM3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AUGGAU*AUAAGAAAU
- Length
- 15 nucleotides
- Bulged bases
- 6RM3|1|L50|A|1323
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6RM3_038 not in the Motif Atlas
- Geometric match to IL_4LFB_031
- Geometric discrepancy: 0.3999
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
6RM3|1|L50|A|1307
6RM3|1|L50|U|1308
6RM3|1|L50|G|1309
6RM3|1|L50|G|1310
6RM3|1|L50|A|1311
6RM3|1|L50|U|1312
*
6RM3|1|L50|A|1320
6RM3|1|L50|U|1321
6RM3|1|L50|A|1322
6RM3|1|L50|A|1323
6RM3|1|L50|G|1324
6RM3|1|L50|A|1325
6RM3|1|L50|A|1326
6RM3|1|L50|A|1327
6RM3|1|L50|U|1328
Current chains
- Chain L50
- 23S rRNA
Nearby chains
- Chain LCC
- eL30
- Chain LGG
- eL34
- Chain LPP
- eL43
- Chain LR0
- eL19
- Chain LZ0
- eL27
Coloring options: