IL_6RM3_057

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUUA*UUUA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6RM3_057 not in the Motif Atlas

Geometric match to IL_6MWN_005

Geometric discrepancy: 0.1852

The information below is about IL_6MWN_005

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

6RM3|1|L50|U|1992
6RM3|1|L50|U|1993
6RM3|1|L50|U|1994
6RM3|1|L50|A|1995
*
6RM3|1|L50|U|2010
6RM3|1|L50|U|2011
6RM3|1|L50|U|2012
6RM3|1|L50|A|2013

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LBB

eL29

Chain LD0

uL18

Chain LOO

eL42

Chain LQ0

eL18

Chain LT0

eL21