IL_6RM3_076

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

6RM3|1|L50|G|2472

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6RM3_076 not in the Motif Atlas

Geometric match to IL_4V9F_099

Geometric discrepancy: 0.1375

The information below is about IL_4V9F_099

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_48489.1

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

8

Unit IDs

6RM3|1|L50|U|2442
6RM3|1|L50|G|2443
6RM3|1|L50|U|2444
6RM3|1|L50|A|2445
6RM3|1|L50|A|2446
6RM3|1|L50|G|2447
*
6RM3|1|L50|U|2470
6RM3|1|L50|U|2471
6RM3|1|L50|G|2472
6RM3|1|L50|A|2473
6RM3|1|L50|G|2474

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LB0

uL3

Chain LDD

eL31

Chain LW0

eL24