IL_6RW4_022

3D structure

PDB id

6RW4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF3

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GACCC*GC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6RW4_022 not in the Motif Atlas

Homologous match to IL_5J7L_036

Geometric discrepancy: 0.2204

The information below is about IL_5J7L_036

Detailed Annotation

Left turn

Broad Annotation

Left turn

Motif group

IL_29346.2

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

6RW4|1|A|G|1062
6RW4|1|A|A|1063
6RW4|1|A|C|1064
6RW4|1|A|C|1065
6RW4|1|A|C|1066
*
6RW4|1|A|G|1092
6RW4|1|A|C|1093

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain I

28S ribosomal protein S11, mitochondrial