IL_6RW5_007
3D structure
- PDB id
- 6RW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.14 Å
Loop
- Sequence
- UAAA*UCA
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6RW5_007 not in the Motif Atlas
- Geometric match to IL_7RQB_031
- Geometric discrepancy: 0.1271
- The information below is about IL_7RQB_031
- Detailed Annotation
- Minor groove platform with extra cWW
- Broad Annotation
- Minor groove platform
- Motif group
- IL_46796.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
6RW5|1|A|U|729
6RW5|1|A|A|730
6RW5|1|A|A|731
6RW5|1|A|A|732
*
6RW5|1|A|U|742
6RW5|1|A|C|743
6RW5|1|A|A|744
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 0
- 28S ribosomal protein S34, mitochondrial
- Chain M
- 28S ribosomal protein S16, mitochondrial
- Chain N
- 28S ribosomal protein S17, mitochondrial
- Chain U
- 28S ribosomal protein S26, mitochondrial
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