IL_6RXU_037
3D structure
- PDB id
- 6RXU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UAUAAG*CGAAA
- Length
- 11 nucleotides
- Bulged bases
- 6RXU|1|C1|U|653, 6RXU|1|C1|A|655
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6RXU_037 not in the Motif Atlas
- Homologous match to IL_4V88_390
- Geometric discrepancy: 0.1766
- The information below is about IL_4V88_390
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87517.1
- Basepair signature
- cWW-L-R-L-R-tHS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6RXU|1|C1|U|651
6RXU|1|C1|A|652
6RXU|1|C1|U|653
6RXU|1|C1|A|654
6RXU|1|C1|A|655
6RXU|1|C1|G|656
*
6RXU|1|C1|C|668
6RXU|1|C1|G|669
6RXU|1|C1|A|670
6RXU|1|C1|A|671
6RXU|1|C1|A|672
Current chains
- Chain C1
- 35S rRNA
Nearby chains
- Chain Cd
- 40S ribosomal protein S6
- Chain UT
- Utp20
Coloring options: