IL_6RZZ_095
3D structure
- PDB id
- 6RZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAU*AGUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6RZZ_095 not in the Motif Atlas
- Homologous match to IL_8C3A_108
- Geometric discrepancy: 0.1201
- The information below is about IL_8C3A_108
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71241.2
- Basepair signature
- cWW-cWW-tSH-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
6RZZ|1|A|C|2666
6RZZ|1|A|A|2667
6RZZ|1|A|U|2668
*
6RZZ|1|A|A|2686
6RZZ|1|A|G|2687
6RZZ|1|A|U|2688
6RZZ|1|A|A|2689
6RZZ|1|A|G|2690
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain E
- 60S ribosomal protein L11-A
- Chain P
- 60S ribosomal protein L5
- Chain T
- 60S ribosomal protein L21-A
- Chain x
- 5S ribosomal RNA; 5S rRNA
Coloring options: