IL_6RZZ_101
3D structure
- PDB id
- 6RZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUGG*CUUUUU
- Length
- 10 nucleotides
- Bulged bases
- 6RZZ|1|A|U|2859, 6RZZ|1|A|U|2860
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6RZZ_101 not in the Motif Atlas
- Geometric match to IL_7A0S_058
- Geometric discrepancy: 0.3664
- The information below is about IL_7A0S_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05553.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
6RZZ|1|A|G|2828
6RZZ|1|A|U|2829
6RZZ|1|A|G|2830
6RZZ|1|A|G|2831
*
6RZZ|1|A|C|2857
6RZZ|1|A|U|2858
6RZZ|1|A|U|2859
6RZZ|1|A|U|2860
6RZZ|1|A|U|2861
6RZZ|1|A|U|2862
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L3
- Chain w
- 60S ribosomal export protein NMD3
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