IL_6RZZ_150
3D structure
- PDB id
- 6RZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUAGUAC*GGAACA
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6RZZ_150 not in the Motif Atlas
- Geometric match to IL_4V9F_092
- Geometric discrepancy: 0.1292
- The information below is about IL_4V9F_092
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_02666.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
6RZZ|1|A|U|3019
6RZZ|1|A|U|3020
6RZZ|1|A|A|3021
6RZZ|1|A|G|3022
6RZZ|1|A|U|3023
6RZZ|1|A|A|3024
6RZZ|1|A|C|3025
*
6RZZ|1|A|G|3030
6RZZ|1|A|G|3031
6RZZ|1|A|A|3032
6RZZ|1|A|A|3033
6RZZ|1|A|C|3034
6RZZ|1|A|A|3035
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain F
- 60S ribosomal protein L9-A
- Chain L
- 60S ribosomal protein L23-A
- Chain n
- Eukaryotic translation initiation factor 6
- Chain s
- Tyrosine-protein phosphatase YVH1
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