IL_6S05_017
3D structure
- PDB id
- 6S05 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AGACAGG*CAUAAU
- Length
- 13 nucleotides
- Bulged bases
- 6S05|1|A|A|440, 6S05|1|A|A|621
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6S05|1|A|A|436
6S05|1|A|G|437
6S05|1|A|A|438
6S05|1|A|C|439
6S05|1|A|A|440
6S05|1|A|G|494
6S05|1|A|G|495
*
6S05|1|A|C|618
6S05|1|A|A|619
6S05|1|A|U|620
6S05|1|A|A|621
6S05|1|A|A|622
6S05|1|A|U|623
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain G
- 60S ribosomal protein L6-A
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
Coloring options: