IL_6S05_096
3D structure
- PDB id
- 6S05 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCAG*UGC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6S05_096 not in the Motif Atlas
- Geometric match to IL_8UO6_002
- Geometric discrepancy: 0.3694
- The information below is about IL_8UO6_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31737.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
6S05|1|A|G|2831
6S05|1|A|C|2832
6S05|1|A|A|2833
6S05|1|A|G|2834
*
6S05|1|A|U|2855
6S05|1|A|G|2856
6S05|1|A|C|2857
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain x
- 5S ribosomal RNA; 5S rRNA
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