IL_6S05_140
3D structure
- PDB id
- 6S05 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CACGUCAAC*GGACGUG
- Length
- 16 nucleotides
- Bulged bases
- 6S05|1|A|G|1514
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6S05|1|A|C|1497
6S05|1|A|A|1498
6S05|1|A|C|1499
6S05|1|A|G|1500
6S05|1|A|U|1501
6S05|1|A|C|1502
6S05|1|A|A|1503
6S05|1|A|A|1504
6S05|1|A|C|1505
*
6S05|1|A|G|1513
6S05|1|A|G|1514
6S05|1|A|A|1515
6S05|1|A|C|1516
6S05|1|A|G|1517
6S05|1|A|U|1518
6S05|1|A|G|1519
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain R
- 60S ribosomal protein L19-A
- Chain U
- 60S ribosomal protein L17-A
- Chain W
- 60S ribosomal protein L25
- Chain k
- 60S ribosomal protein L39
- Chain y
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain z
- Cytoplasmic 60S subunit biogenesis factor REH1
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