IL_6S05_149
3D structure
- PDB id
- 6S05 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UAG*UGGG
- Length
- 7 nucleotides
- Bulged bases
- 6S05|1|A|G|2606
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6S05_149 not in the Motif Atlas
- Homologous match to IL_8C3A_100
- Geometric discrepancy: 0.1344
- The information below is about IL_8C3A_100
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38958.10
- Basepair signature
- cWW-cWW-cWW-tHS
- Number of instances in this motif group
- 9
Unit IDs
6S05|1|A|U|2423
6S05|1|A|A|2424
6S05|1|A|G|2425
*
6S05|1|A|U|2604
6S05|1|A|G|2605
6S05|1|A|G|2606
6S05|1|A|G|2607
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain B
- 60S ribosomal protein L2-A
- Chain O
- 60S ribosomal protein L15-A
- Chain l
- 60S ribosomal protein L42-A
- Chain w
- 60S ribosomal export protein NMD3
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