IL_6S0K_030

3D structure

PDB id

6S0K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome nascent chain in complex with SecA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGG*UACC

Length

7 nucleotides

Bulged bases

6S0K|1|A|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6S0K_030 not in the Motif Atlas

Geometric match to IL_1NBS_006

Geometric discrepancy: 0.3836

The information below is about IL_1NBS_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

6S0K|1|A|G|879
6S0K|1|A|G|880
6S0K|1|A|G|881
*
6S0K|1|A|U|895
6S0K|1|A|A|896
6S0K|1|A|C|897
6S0K|1|A|C|898

Current chains

Chain A

23S ribosomal RNA

Nearby chains