IL_6S0X_122
3D structure
- PDB id
- 6S0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- UG*UAA
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6S0X_122 not in the Motif Atlas
- Homologous match to IL_4LFB_028
- Geometric discrepancy: 0.4589
- The information below is about IL_4LFB_028
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48076.6
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 41
Unit IDs
6S0X|1|a|U|665
6S0X|1|a|G|666
*
6S0X|1|a|U|755
6S0X|1|a|A|756
6S0X|1|a|A|757
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain o
- 30S ribosomal protein S15
Coloring options: