IL_6S0X_142

3D structure

PDB id

6S0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

GGCAG*CAAAUCC

Length

12 nucleotides

Bulged bases

6S0X|1|a|C|1266, 6S0X|1|a|A|1290

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S0X|1|a|G|1264
6S0X|1|a|G|1265
6S0X|1|a|C|1266
6S0X|1|a|A|1267
6S0X|1|a|G|1268
*
6S0X|1|a|C|1287
6S0X|1|a|A|1288
6S0X|1|a|A|1289
6S0X|1|a|A|1290
6S0X|1|a|U|1291
6S0X|1|a|C|1292
6S0X|1|a|C|1293

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10

Chain n

30S ribosomal protein S14 type Z