IL_6S0X_144
3D structure
- PDB id
- 6S0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- CGGAUU*AUGAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6S0X_144 not in the Motif Atlas
- Geometric match to IL_5TBW_026
- Geometric discrepancy: 0.2953
- The information below is about IL_5TBW_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82488.1
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
6S0X|1|a|C|1313
6S0X|1|a|G|1314
6S0X|1|a|G|1315
6S0X|1|a|A|1316
6S0X|1|a|U|1317
6S0X|1|a|U|1318
*
6S0X|1|a|A|1339
6S0X|1|a|U|1340
6S0X|1|a|G|1341
6S0X|1|a|A|1342
6S0X|1|a|A|1343
6S0X|1|a|G|1344
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain m
- 30S ribosomal protein S13
Coloring options: