IL_6S0X_155

3D structure

PDB id

6S0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

CUCUACGGAGUUACAAAGGACGACAUUAG*CGAAAAUGUUGUCUCUCUUGAG

Length

51 nucleotides

Bulged bases

6S0X|1|A|C|315, 6S0X|1|A|A|332, 6S0X|1|A|C|333, 6S0X|1|A|U|392, 6S0X|1|A|U|397, 6S0X|1|A|C|398, 6S0X|1|A|G|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S0X|1|A|C|308
6S0X|1|A|U|309
6S0X|1|A|C|310
6S0X|1|A|U|311
6S0X|1|A|A|312
6S0X|1|A|C|315
6S0X|1|A|G|316
6S0X|1|A|G|317
6S0X|1|A|A|318
6S0X|1|A|G|319
6S0X|1|A|U|320
6S0X|1|A|U|321
6S0X|1|A|A|322
6S0X|1|A|C|323
6S0X|1|A|A|324
6S0X|1|A|A|325
6S0X|1|A|A|326
6S0X|1|A|G|327
6S0X|1|A|G|328
6S0X|1|A|A|329
6S0X|1|A|C|330
6S0X|1|A|G|331
6S0X|1|A|A|332
6S0X|1|A|C|333
6S0X|1|A|A|334
6S0X|1|A|U|335
6S0X|1|A|U|336
6S0X|1|A|A|337
6S0X|1|A|G|338
*
6S0X|1|A|C|386
6S0X|1|A|G|387
6S0X|1|A|A|388
6S0X|1|A|A|389
6S0X|1|A|A|390
6S0X|1|A|A|391
6S0X|1|A|U|392
6S0X|1|A|G|393
6S0X|1|A|U|394
6S0X|1|A|U|395
6S0X|1|A|G|396
6S0X|1|A|U|397
6S0X|1|A|C|398
6S0X|1|A|U|399
6S0X|1|A|C|400
6S0X|1|A|U|401
6S0X|1|A|C|402
6S0X|1|A|U|403
6S0X|1|A|U|404
6S0X|1|A|G|405
6S0X|1|A|A|406
6S0X|1|A|G|407

Current chains

Chain A

23S ribosomal RNA

Nearby chains