3D structure

PDB id
6S0X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
Experimental method
ELECTRON MICROSCOPY
Resolution
2.42 Å

Loop

Sequence
AUUGGAGGUAGAGCACUG*CAAACUCCGAAUGCCAAUU
Length
37 nucleotides
Bulged bases
6S0X|1|A|G|904, 6S0X|1|A|U|970
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6S0X|1|A|A|897
6S0X|1|A|U|898
6S0X|1|A|U|899
6S0X|1|A|G|900
6S0X|1|A|G|901
6S0X|1|A|A|902
6S0X|1|A|G|903
6S0X|1|A|G|904
6S0X|1|A|U|905
6S0X|1|A|A|906
6S0X|1|A|G|907
6S0X|1|A|A|908
6S0X|1|A|G|909
6S0X|1|A|C|910
6S0X|1|A|A|911
6S0X|1|A|C|912
6S0X|1|A|U|913
6S0X|1|A|G|914
*
6S0X|1|A|C|953
6S0X|1|A|A|954
6S0X|1|A|A|955
6S0X|1|A|A|956
6S0X|1|A|C|957
6S0X|1|A|U|958
6S0X|1|A|C|959
6S0X|1|A|C|960
6S0X|1|A|G|961
6S0X|1|A|A|962
6S0X|1|A|A|963
6S0X|1|A|U|964
6S0X|1|A|G|965
6S0X|1|A|C|966
6S0X|1|A|C|967
6S0X|1|A|A|968
6S0X|1|A|A|969
6S0X|1|A|U|970
6S0X|1|A|U|971

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain B
5S ribosomal RNA; 5S rRNA
Chain K
50S ribosomal protein L16
Chain U
50S ribosomal protein L27
Chain X
50S ribosomal protein L30

Coloring options:

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