3D structure

PDB id
6S0X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
Experimental method
ELECTRON MICROSCOPY
Resolution
2.42 Å

Loop

Sequence
CUAAGGU*ACCGAAG
Length
14 nucleotides
Bulged bases
6S0X|1|A|A|1200
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6S0X|1|A|C|1042
6S0X|1|A|U|1043
6S0X|1|A|A|1044
6S0X|1|A|A|1045
6S0X|1|A|G|1046
6S0X|1|A|G|1047
6S0X|1|A|U|1048
*
6S0X|1|A|A|1195
6S0X|1|A|C|1196
6S0X|1|A|C|1197
6S0X|1|A|G|1198
6S0X|1|A|A|1199
6S0X|1|A|A|1200
6S0X|1|A|G|1201

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain B
5S ribosomal RNA; 5S rRNA
Chain O
50S ribosomal protein L20
Chain P
50S ribosomal protein L21
Chain X
50S ribosomal protein L30

Coloring options:

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