3D structure

PDB id
6S0X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
Experimental method
ELECTRON MICROSCOPY
Resolution
2.42 Å

Loop

Sequence
CCCAGACAACUAGGAUGUUGGC*GCCAUCAUUUAAAGAGUGCGUAAUAGCUCACUAGUCGAG
Length
61 nucleotides
Bulged bases
6S0X|1|A|C|1089, 6S0X|1|A|A|1090, 6S0X|1|A|G|1091, 6S0X|1|A|A|1139
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6S0X|1|A|C|1087
6S0X|1|A|C|1088
6S0X|1|A|C|1089
6S0X|1|A|A|1090
6S0X|1|A|G|1091
6S0X|1|A|A|1092
6S0X|1|A|C|1093
6S0X|1|A|A|1094
6S0X|1|A|A|1095
6S0X|1|A|C|1096
6S0X|1|A|U|1097
6S0X|1|A|A|1098
6S0X|1|A|G|1099
6S0X|1|A|G|1100
6S0X|1|A|A|1101
6S0X|1|A|U|1102
6S0X|1|A|G|1103
6S0X|1|A|U|1104
6S0X|1|A|U|1105
6S0X|1|A|G|1106
6S0X|1|A|G|1107
6S0X|1|A|C|1108
*
6S0X|1|A|G|1118
6S0X|1|A|C|1119
6S0X|1|A|C|1120
6S0X|1|A|A|1121
6S0X|1|A|U|1122
6S0X|1|A|C|1123
6S0X|1|A|A|1124
6S0X|1|A|U|1125
6S0X|1|A|U|1126
6S0X|1|A|U|1127
6S0X|1|A|A|1128
6S0X|1|A|A|1129
6S0X|1|A|A|1130
6S0X|1|A|G|1131
6S0X|1|A|A|1132
6S0X|1|A|G|1133
6S0X|1|A|U|1134
6S0X|1|A|G|1135
6S0X|1|A|C|1136
6S0X|1|A|G|1137
6S0X|1|A|U|1138
6S0X|1|A|A|1139
6S0X|1|A|A|1140
6S0X|1|A|U|1141
6S0X|1|A|A|1142
6S0X|1|A|G|1143
6S0X|1|A|C|1144
6S0X|1|A|U|1145
6S0X|1|A|C|1146
6S0X|1|A|A|1147
6S0X|1|A|C|1148
6S0X|1|A|U|1149
6S0X|1|A|A|1150
6S0X|1|A|G|1151
6S0X|1|A|U|1152
6S0X|1|A|C|1153
6S0X|1|A|G|1154
6S0X|1|A|A|1155
6S0X|1|A|G|1156

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 4
50S ribosomal protein L36
Chain G
50S ribosomal protein L6

Coloring options:

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