3D structure

PDB id
6S0X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
Experimental method
ELECTRON MICROSCOPY
Resolution
2.42 Å

Loop

Sequence
GAAGGUUAAG*CGAAGCCC
Length
18 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6S0X|1|A|G|1873
6S0X|1|A|A|1874
6S0X|1|A|A|1875
6S0X|1|A|G|1876
6S0X|1|A|G|1877
6S0X|1|A|U|1878
6S0X|1|A|U|1879
6S0X|1|A|A|1880
6S0X|1|A|A|1881
6S0X|1|A|G|1882
*
6S0X|1|A|C|1914
6S0X|1|A|G|1915
6S0X|1|A|A|1916
6S0X|1|A|A|1917
6S0X|1|A|G|1918
6S0X|1|A|C|1919
6S0X|1|A|C|1920
6S0X|1|A|C|1921

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain a
Small subunit ribosomal RNA; SSU rRNA

Coloring options:

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