IL_6S0X_170

3D structure

PDB id

6S0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

GCUUGUACAGGAUAGGUA*UACCCUAGC

Length

27 nucleotides

Bulged bases

6S0X|1|A|G|2137, 6S0X|1|A|U|2138, 6S0X|1|A|C|2140, 6S0X|1|A|A|2141, 6S0X|1|A|G|2142, 6S0X|1|A|G|2143, 6S0X|1|A|A|2144, 6S0X|1|A|U|2145

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S0X|1|A|G|2133
6S0X|1|A|C|2134
6S0X|1|A|U|2135
6S0X|1|A|U|2136
6S0X|1|A|G|2137
6S0X|1|A|U|2138
6S0X|1|A|A|2139
6S0X|1|A|C|2140
6S0X|1|A|A|2141
6S0X|1|A|G|2142
6S0X|1|A|G|2143
6S0X|1|A|A|2144
6S0X|1|A|U|2145
6S0X|1|A|A|2146
6S0X|1|A|G|2147
6S0X|1|A|G|2148
6S0X|1|A|U|2149
6S0X|1|A|A|2150
*
6S0X|1|A|U|2202
6S0X|1|A|A|2203
6S0X|1|A|C|2204
6S0X|1|A|C|2205
6S0X|1|A|C|2206
6S0X|1|A|U|2207
6S0X|1|A|A|2208
6S0X|1|A|G|2209
6S0X|1|A|C|2210

Current chains

Chain A

23S ribosomal RNA

Nearby chains