IL_6S12_078

3D structure

PDB id

6S12 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAG*CGCUGGUGGGAUAC

Length

18 nucleotides

Bulged bases

6S12|1|A|U|2194, 6S12|1|A|A|2198, 6S12|1|A|U|2199

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S12|1|A|G|2151
6S12|1|A|G|2152
6S12|1|A|A|2153
6S12|1|A|G|2154
*
6S12|1|A|C|2188
6S12|1|A|G|2189
6S12|1|A|C|2190
6S12|1|A|U|2191
6S12|1|A|G|2192
6S12|1|A|G|2193
6S12|1|A|U|2194
6S12|1|A|G|2195
6S12|1|A|G|2196
6S12|1|A|G|2197
6S12|1|A|A|2198
6S12|1|A|U|2199
6S12|1|A|A|2200
6S12|1|A|C|2201

Current chains

Chain A

23S ribosomal RNA

Nearby chains