IL_6S12_116

3D structure

PDB id

6S12 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUAAUCGUUUUAAUCGAUG*CUAGAUAGAAAAU

Length

32 nucleotides

Bulged bases

6S12|1|A|A|1450, 6S12|1|A|U|1464

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S12|1|A|A|1447
6S12|1|A|U|1448
6S12|1|A|A|1449
6S12|1|A|A|1450
6S12|1|A|U|1451
6S12|1|A|C|1452
6S12|1|A|G|1453
6S12|1|A|U|1454
6S12|1|A|U|1455
6S12|1|A|U|1456
6S12|1|A|U|1457
6S12|1|A|A|1458
6S12|1|A|A|1459
6S12|1|A|U|1460
6S12|1|A|C|1461
6S12|1|A|G|1462
6S12|1|A|A|1463
6S12|1|A|U|1464
6S12|1|A|G|1465
*
6S12|1|A|C|1624
6S12|1|A|U|1625
6S12|1|A|A|1626
6S12|1|A|G|1627
6S12|1|A|A|1628
6S12|1|A|U|1629
6S12|1|A|A|1630
6S12|1|A|G|1631
6S12|1|A|A|1632
6S12|1|A|A|1633
6S12|1|A|A|1634
6S12|1|A|A|1635
6S12|1|A|U|1636

Current chains

Chain A

23S ribosomal RNA

Nearby chains