3D structure

PDB id
6S13 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).
Experimental method
ELECTRON MICROSCOPY
Resolution
3.58 Å

Loop

Sequence
UUGCCCAGACAA*UCGAGUGA
Length
20 nucleotides
Bulged bases
6S13|1|A|A|1090
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6S13|1|A|U|1084
6S13|1|A|U|1085
6S13|1|A|G|1086
6S13|1|A|C|1087
6S13|1|A|C|1088
6S13|1|A|C|1089
6S13|1|A|A|1090
6S13|1|A|G|1091
6S13|1|A|A|1092
6S13|1|A|C|1093
6S13|1|A|A|1094
6S13|1|A|A|1095
*
6S13|1|A|U|1152
6S13|1|A|C|1153
6S13|1|A|G|1154
6S13|1|A|A|1155
6S13|1|A|G|1156
6S13|1|A|U|1157
6S13|1|A|G|1158
6S13|1|A|A|1159

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 4
50S ribosomal protein L36
Chain G
50S ribosomal protein L6
Chain K
50S ribosomal protein L16
Chain T
50S ribosomal protein L25

Coloring options:

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