IL_6S13_100

3D structure

PDB id

6S13 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.58 Å

Loop

Sequence

GAUAAGU*AUGAAGC

Length

14 nucleotides

Bulged bases

6S13|1|A|A|2792

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S13|1|A|G|2764
6S13|1|A|A|2765
6S13|1|A|U|2766
6S13|1|A|A|2767
6S13|1|A|A|2768
6S13|1|A|G|2769
6S13|1|A|U|2770
*
6S13|1|A|A|2788
6S13|1|A|U|2789
6S13|1|A|G|2790
6S13|1|A|A|2791
6S13|1|A|A|2792
6S13|1|A|G|2793
6S13|1|A|C|2794

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6

Chain H

50S ribosomal protein L13