IL_6S13_111
3D structure
- PDB id
- 6S13 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.58 Å
Loop
- Sequence
- UGA*UA
- Length
- 5 nucleotides
- Bulged bases
- 6S13|1|a|G|32
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6S13_111 not in the Motif Atlas
- Homologous match to IL_4LFB_001
- Geometric discrepancy: 0.5663
- The information below is about IL_4LFB_001
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.13
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 49
Unit IDs
6S13|1|a|U|31
6S13|1|a|G|32
6S13|1|a|A|33
*
6S13|1|a|U|560
6S13|1|a|A|561
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
Coloring options: