IL_6S13_138

3D structure

PDB id

6S13 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.58 Å

Loop

Sequence

GGAAUU*AGGAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S13|1|a|G|681
6S13|1|a|G|682
6S13|1|a|A|683
6S13|1|a|A|684
6S13|1|a|U|685
6S13|1|a|U|686
*
6S13|1|a|A|720
6S13|1|a|G|721
6S13|1|a|G|722
6S13|1|a|A|723
6S13|1|a|A|724
6S13|1|a|C|725

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain f

30S ribosomal protein S6

Chain k

30S ribosomal protein S11

Chain r

30S ribosomal protein S18

Chain u

30S ribosomal protein S21