IL_6S13_143

3D structure

PDB id

6S13 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.58 Å

Loop

Sequence

GACGGG*UUGUAC

Length

12 nucleotides

Bulged bases

6S13|1|a|G|935, 6S13|1|a|A|1404

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S13|1|a|G|931
6S13|1|a|A|932
6S13|1|a|C|933
6S13|1|a|G|934
6S13|1|a|G|935
6S13|1|a|G|936
*
6S13|1|a|U|1400
6S13|1|a|U|1401
6S13|1|a|G|1402
6S13|1|a|U|1403
6S13|1|a|A|1404
6S13|1|a|C|1405

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain e

30S ribosomal protein S5

Chain g

30S ribosomal protein S7

Chain v

Ribosome hibernation promoting factor