IL_6S13_149

3D structure

PDB id

6S13 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.58 Å

Loop

Sequence

GGUUG*CAAAUCAUC

Length

14 nucleotides

Bulged bases

6S13|1|a|A|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S13|1|a|G|1068
6S13|1|a|G|1069
6S13|1|a|U|1070
6S13|1|a|U|1071
6S13|1|a|G|1072
*
6S13|1|a|C|1205
6S13|1|a|A|1206
6S13|1|a|A|1207
6S13|1|a|A|1208
6S13|1|a|U|1209
6S13|1|a|C|1210
6S13|1|a|A|1211
6S13|1|a|U|1212
6S13|1|a|C|1213

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain j

30S ribosomal protein S10

Chain n

30S ribosomal protein S14 type Z

Chain v

Ribosome hibernation promoting factor