IL_6S13_151

3D structure

PDB id

6S13 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.58 Å

Loop

Sequence

UAGUUGCCAUC*GGGCACUCUAA

Length

22 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S13|1|a|U|1133
6S13|1|a|A|1134
6S13|1|a|G|1135
6S13|1|a|U|1136
6S13|1|a|U|1137
6S13|1|a|G|1138
6S13|1|a|C|1139
6S13|1|a|C|1140
6S13|1|a|A|1141
6S13|1|a|U|1142
6S13|1|a|C|1143
*
6S13|1|a|G|1152
6S13|1|a|G|1153
6S13|1|a|G|1154
6S13|1|a|C|1155
6S13|1|a|A|1156
6S13|1|a|C|1157
6S13|1|a|U|1158
6S13|1|a|C|1159
6S13|1|a|U|1160
6S13|1|a|A|1161
6S13|1|a|A|1162

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10