IL_6S13_152

3D structure

PDB id

6S13 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.58 Å

Loop

Sequence

UACAAAGG*CAUAAAG

Length

15 nucleotides

Bulged bases

6S13|1|a|U|1296

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S13|1|a|U|1257
6S13|1|a|A|1258
6S13|1|a|C|1259
6S13|1|a|A|1260
6S13|1|a|A|1261
6S13|1|a|A|1262
6S13|1|a|G|1263
6S13|1|a|G|1264
*
6S13|1|a|C|1294
6S13|1|a|A|1295
6S13|1|a|U|1296
6S13|1|a|A|1297
6S13|1|a|A|1298
6S13|1|a|A|1299
6S13|1|a|G|1300

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S7

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10