IL_6S13_156

3D structure

PDB id

6S13 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.58 Å

Loop

Sequence

GCCCGUC*GUCGUAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S13|1|a|G|1411
6S13|1|a|C|1412
6S13|1|a|C|1413
6S13|1|a|C|1414
6S13|1|a|G|1415
6S13|1|a|U|1416
6S13|1|a|C|1417
*
6S13|1|a|G|1505
6S13|1|a|U|1506
6S13|1|a|C|1507
6S13|1|a|G|1508
6S13|1|a|U|1509
6S13|1|a|A|1510
6S13|1|a|A|1511
6S13|1|a|C|1512

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain v

Ribosome hibernation promoting factor