Loop IL_6S13

3D structure

PDB id: 6S13 (explore in PDB, NAKB, or RNA 3D Hub)
Description: Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å

Loop

Sequence: ACUCUACGGAGUUACAAAGGACGACAUUAG*CGAAAAUGUUGUCUCUCUUGAGU
Length: 53 nucleotides
Bulged bases: 6S13|1|A|G|319, 6S13|1|A|U|320, 6S13|1|A|C|323, 6S13|1|A|G|327, 6S13|1|A|G|331, 6S13|1|A|U|399, 6S13|1|A|U|403
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6S13|1|A|A|307
6S13|1|A|C|308
6S13|1|A|U|309
6S13|1|A|C|310
6S13|1|A|U|311
6S13|1|A|A|312
6S13|1|A|C|315
6S13|1|A|G|316
6S13|1|A|G|317
6S13|1|A|A|318
6S13|1|A|G|319
6S13|1|A|U|320
6S13|1|A|U|321
6S13|1|A|A|322
6S13|1|A|C|323
6S13|1|A|A|324
6S13|1|A|A|325
6S13|1|A|A|326
6S13|1|A|G|327
6S13|1|A|G|328
6S13|1|A|A|329
6S13|1|A|C|330
6S13|1|A|G|331
6S13|1|A|A|332
6S13|1|A|C|333
6S13|1|A|A|334
6S13|1|A|U|335
6S13|1|A|U|336
6S13|1|A|A|337
6S13|1|A|G|338
*
6S13|1|A|C|386
6S13|1|A|G|387
6S13|1|A|A|388
6S13|1|A|A|389
6S13|1|A|A|390
6S13|1|A|A|391
6S13|1|A|U|392
6S13|1|A|G|393
6S13|1|A|U|394
6S13|1|A|U|395
6S13|1|A|G|396
6S13|1|A|U|397
6S13|1|A|C|398
6S13|1|A|U|399
6S13|1|A|C|400
6S13|1|A|U|401
6S13|1|A|C|402
6S13|1|A|U|403
6S13|1|A|U|404
6S13|1|A|G|405
6S13|1|A|A|406
6S13|1|A|G|407
6S13|1|A|U|408

Current chains

Chain A: 23S ribosomal RNA

Nearby chains

Chain S: 50S ribosomal protein L24

IL_6S13_163