IL_6S13_167

3D structure

PDB id

6S13 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.58 Å

Loop

Sequence

AUAAUCGUUUUAAUCGAUG*CUAGAUAGAAAAU

Length

32 nucleotides

Bulged bases

6S13|1|A|A|1450, 6S13|1|A|U|1464

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S13|1|A|A|1447
6S13|1|A|U|1448
6S13|1|A|A|1449
6S13|1|A|A|1450
6S13|1|A|U|1451
6S13|1|A|C|1452
6S13|1|A|G|1453
6S13|1|A|U|1454
6S13|1|A|U|1455
6S13|1|A|U|1456
6S13|1|A|U|1457
6S13|1|A|A|1458
6S13|1|A|A|1459
6S13|1|A|U|1460
6S13|1|A|C|1461
6S13|1|A|G|1462
6S13|1|A|A|1463
6S13|1|A|U|1464
6S13|1|A|G|1465
*
6S13|1|A|C|1624
6S13|1|A|U|1625
6S13|1|A|A|1626
6S13|1|A|G|1627
6S13|1|A|A|1628
6S13|1|A|U|1629
6S13|1|A|A|1630
6S13|1|A|G|1631
6S13|1|A|A|1632
6S13|1|A|A|1633
6S13|1|A|A|1634
6S13|1|A|A|1635
6S13|1|A|U|1636

Current chains

Chain A

23S ribosomal RNA

Nearby chains