IL_6S13_178

3D structure

PDB id

6S13 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.58 Å

Loop

Sequence

CUGGGAUAAC*GCUAAUACCGG

Length

21 nucleotides

Bulged bases

6S13|1|a|U|145, 6S13|1|a|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S13|1|a|C|144
6S13|1|a|U|145
6S13|1|a|G|146
6S13|1|a|G|147
6S13|1|a|G|148
6S13|1|a|A|149
6S13|1|a|U|150
6S13|1|a|A|151
6S13|1|a|A|152
6S13|1|a|C|153
*
6S13|1|a|G|168
6S13|1|a|C|169
6S13|1|a|U|170
6S13|1|a|A|171
6S13|1|a|A|172
6S13|1|a|U|173
6S13|1|a|A|174
6S13|1|a|C|175
6S13|1|a|C|176
6S13|1|a|G|177
6S13|1|a|G|178

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20