3D structure

PDB id
6S13 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).
Experimental method
ELECTRON MICROSCOPY
Resolution
3.58 Å

Loop

Sequence
AAGAGG*CUGGU
Length
11 nucleotides
Bulged bases
6S13|1|a|A|673
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6S13|1|a|A|670
6S13|1|a|A|671
6S13|1|a|G|672
6S13|1|a|A|673
6S13|1|a|G|674
6S13|1|a|G|675
*
6S13|1|a|C|747
6S13|1|a|U|748
6S13|1|a|G|749
6S13|1|a|G|750
6S13|1|a|U|751

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain f
30S ribosomal protein S6
Chain o
30S ribosomal protein S15
Chain r
30S ribosomal protein S18
Chain u
30S ribosomal protein S21

Coloring options:

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