IL_6S13_187

3D structure

PDB id

6S13 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.58 Å

Loop

Sequence

GGAGUACGACC*GGUUGAAAC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S13|1|a|G|896
6S13|1|a|G|897
6S13|1|a|A|898
6S13|1|a|G|899
6S13|1|a|U|900
6S13|1|a|A|901
6S13|1|a|C|902
6S13|1|a|G|903
6S13|1|a|A|904
6S13|1|a|C|905
6S13|1|a|C|906
*
6S13|1|a|G|911
6S13|1|a|G|912
6S13|1|a|U|913
6S13|1|a|U|914
6S13|1|a|G|915
6S13|1|a|A|916
6S13|1|a|A|917
6S13|1|a|A|918
6S13|1|a|C|919

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S12