IL_6SGC_075

3D structure

PDB id

6SGC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome stalled on a poly(A) tail

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CCG*CG

Length

5 nucleotides

Bulged bases

6SGC|1|54|C|1921

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGC|1|54|C|1920
6SGC|1|54|C|1921
6SGC|1|54|G|1922
*
6SGC|1|54|C|2062
6SGC|1|54|G|2063

Current chains

Chain 54

28S ribosomal RNA

Nearby chains

Chain F2

uL30

Chain M2

Ribosomal protein L14

Chain O2

uL13

Chain S2

eL20

Chain f2

eL33