IL_6SGC_155

3D structure

PDB id

6SGC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome stalled on a poly(A) tail

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGAAACG*CUCGCC

Length

13 nucleotides

Bulged bases

6SGC|1|54|C|4895

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGC|1|54|G|4890
6SGC|1|54|G|4891
6SGC|1|54|A|4892
6SGC|1|54|A|4893
6SGC|1|54|A|4894
6SGC|1|54|C|4895
6SGC|1|54|G|4896
*
6SGC|1|54|C|4924
6SGC|1|54|U|4925
6SGC|1|54|C|4926
6SGC|1|54|G|4927
6SGC|1|54|C|4928
6SGC|1|54|C|4929

Current chains

Chain 54

28S ribosomal RNA

Nearby chains

Chain E2

60S ribosomal protein L6

Chain M2

Ribosomal protein L14

Chain O2

uL13