IL_6SGC_233

3D structure

PDB id

6SGC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome stalled on a poly(A) tail

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GACAGGA*UUC

Length

10 nucleotides

Bulged bases

6SGC|1|A1|G|1285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGC|1|A1|G|1281
6SGC|1|A1|A|1282
6SGC|1|A1|C|1283
6SGC|1|A1|A|1284
6SGC|1|A1|G|1285
6SGC|1|A1|G|1286
6SGC|1|A1|A|1287
*
6SGC|1|A1|U|1314
6SGC|1|A1|U|1315
6SGC|1|A1|C|1316

Current chains

Chain A1

18S ribosomal RNA

Nearby chains

Chain L1

S10_plectin domain-ontaining protein

Chain N1

40S ribosomal protein S12

Chain g1

Ribosomal protein S27a