IL_6SGC_234

3D structure

PDB id

6SGC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome stalled on a poly(A) tail

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AUUG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGC|1|A1|A|1287
6SGC|1|A1|U|1288
6SGC|1|A1|U|1289
6SGC|1|A1|G|1290
*
6SGC|1|A1|C|1309
6SGC|1|A1|U|1310
6SGC|1|A1|C|1311
6SGC|1|A1|G|1312
6SGC|1|A1|A|1313
6SGC|1|A1|U|1314

Current chains

Chain A1

18S ribosomal RNA

Nearby chains

Chain L1

S10_plectin domain-ontaining protein

Chain N1

40S ribosomal protein S12

Chain e1

uS14

Chain g1

Ribosomal protein S27a