IL_6SGC_276
3D structure
- PDB id
- 6SGC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome stalled on a poly(A) tail
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 6SGC|1|A1|U|1585, 6SGC|1|A1|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SGC|1|A1|G|1541
6SGC|1|A1|C|1542
6SGC|1|A1|U|1543
6SGC|1|A1|C|1544
6SGC|1|A1|A|1545
6SGC|1|A1|G|1546
6SGC|1|A1|C|1547
6SGC|1|A1|G|1548
6SGC|1|A1|U|1549
6SGC|1|A1|G|1550
*
6SGC|1|A1|C|1582
6SGC|1|A1|C|1583
6SGC|1|A1|G|1584
6SGC|1|A1|U|1585
6SGC|1|A1|U|1586
6SGC|1|A1|G|1587
6SGC|1|A1|A|1588
6SGC|1|A1|A|1589
6SGC|1|A1|C|1590
6SGC|1|A1|C|1591
6SGC|1|A1|C|1592
Current chains
- Chain A1
- 18S ribosomal RNA
Nearby chains
- Chain E1
- uS5
- Chain G1
- Ribosomal protein S5
- Chain R1
- Ribosomal protein S16
- Chain U1
- eS19
- Chain V1
- Ribosomal_S10 domain-containing protein
- Chain a1
- eS25
- Chain e1
- uS14
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